主要研究方向：微生物生态学；环境科学；宏基因组学
电话：
邮箱：
linxingchen@ustc.edu.cn
实验室主页：
https://faculty.ustc.edu.cn/chenlinxing
个人主页：
https://www.researchgate.net/profile/Linxing-Chen
2024.5-至今，中国科学技术大学环境科学与工程系，特任研究员
2022.6-2024.4，美国加州大学伯克利分校，联合项目科学家
2017.6-2022.5，美国加州大学伯克利分校，博士后，合作导师：Jillian F Banfield院士
2015.7-2017.5，中山大学，博士后，合作导师：贺雄雷教授
2010.9-2015.6，中山大学，环境科学，博士，导师：束文圣教授
2006.9-2010.6，中山大学，生态学，学士，导师：黄立南教授
1. 多种自然环境中噬菌体（尤其是大噬菌体）的多样性和功能分析
2. 淡水湖泊湿地等环境中驱动甲烷循环的微生物和病毒及其互作关系
3. 与土壤碳氮循环相关的微生物和其他染色体外遗传物质
4. 宏基因组学优化分析工具的开发等
中国科学院人才计划（2024）
LinXing Chen *, Jillian F Banfield *. COBRA improves the completeness and contiguity of viral genomes assembled from metagenomes. Nature Microbiology 9, 737–750 (2024). https://doi.org/10.1038/s41564-023-01598-2.
Kelly J Whaley-Martin #, LinXing Chen #, Tara Colebrander Nelson, Jay Gordon, Rose Kantor, Lauren E Twible, Stephanie Marshall, Laura Rossi, Benoit Bessette, Christian Baron, Simon Apte, Jill Banfield, Lesley A Warren. O2 partitioning of sulfur oxidizing bacteria drives acidity and thiosulfate distributions in mining waters. Nature Communications (2023), 14(1), p.2006.
LinXing Chen, Raphael Meheust, Alexander Crits-Christoph, Katherine D McMahon, Tara Colenbrander Nelson, Lesley A Warren, Jill Banfield. Large Freshwater Phages with the Potential to Augment Aerobic Methane Oxidation. Nature Microbiology 5 (2020): 1504-1515.
Al-Shayeb B #, Sachdeva R #, LinXing Chen, et al. and Jillian F. Banfield. Clades of huge phage from across Earth’s ecosystems. Nature 578 (2020): 425-431.
LinXing Chen, Karthik Anantharaman, Alon Shaiber, A. Murat Eren, and Jillian F. Banfield. Accurate and Complete Genomes from Metagenomes. Genome Research (2020). doi:10.1101/gr.258640.119.
LinXing Chen, Yanlin Zhao, Katherine D. McMahon, Jiro F. Mori, Gerdhard L. Jessen, Tara Colenbrander Nelson, Lesley A. Warren, and Jillian F. Banfield. Wide distribution of phage that infect freshwater SAR11 bacteria. mSystems 4, no. 5 (2019): e00410-19.
LinXing Chen, Celia Méndez-García, Nina Dombrowski, Luis E. Servín-Garcidueñas, Emiley A. Eloe-Fadrosh, Bao-Zhu Fang, Zhen-Hao Luo, Sha Tan, Xiao-Yang Zhi, Zheng- Shuang Hua, Esperanza Martinez-Romero, Tanja Woyke, Li-Nan Huang, Jesús Sánchez, Ana Isabel Peláez, Manuel Ferrer, Brett J. Baker, Wen-Sheng Shu. Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota. The ISME journal (2018) 12: 756-775.
LinXing Chen, Li-nan Huang, Celia Méndez-García, Jia-liang Kuang, Zheng-shuang Hua, Jun Liu, Wen-sheng Shu. Microbial communities, processes and functions in acid mine drainage ecosystems. Current opinion in biotechnology (2016) 38: 150-158.
LinXing Chen #, Min Hu #, Li-nan Huang, Zheng-shuang Hua, Jia-liang Kuang, Sheng-jin Li and Wen-sheng Shu. Comparative metagenomic and metatranscriptomic analyses of microbial communities in acid mine drainage. The ISME Journal (2015) 9: 1579-1592.
Zheng-Shuang Hua #, Yu-Jiao Han#, LinXing Chen #, Jun Liu, Min Hu, Sheng-Jin Li, Jia-Liang Kuang, Patrick SG Chain, Li-Nan Huang, and Wen-Sheng Shu. "Ecological roles of dominant and rare prokaryotes in acid mine drainage revealed by metagenomics and metatranscriptomics." The ISME journal (2015) 9: 1280-1294.
